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ydjH [2019-06-07 09:09:31]
Genomic Context
categories
[category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins][category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]Gene
Coordinates
673,019 673,783
The protein
Protein family
UPF0603 family (according to Swiss-Prot)[SW|Localization]
cell membrane (according to Swiss-Prot)Expression and Regulation
Operons
genes
[gene|3B6F4FBB19401069E827EAF5835DD15AAA3C3487|pspA]-[gene|F93381205C61665820D034A384BD60410AAE84C1|ydjG]-[gene|938B55332DFB2B465D0D5AD530550CED5AC30A92|ydjH]-[gene|CA4EF8385EAA4BBC47FF0D998C820D9F36F5F94D|ydjI]
description
[Pubmed|11454200]
sigma factors
[protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW]: sigma factor, [Pubmed|11454200], in [regulon|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW regulon]regulatory mechanism
[protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|18840696,20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]regulation
induced by alkaline shock ([protein|search|SigW]) [Pubmed|11454200]view in new tabBiological materials
Mutant
MGNA-C215 (ydjH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2213 NBRP B. subtilis, Japan]BKE06200 ([gene|938B55332DFB2B465D0D5AD530550CED5AC30A92|ydjH]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE06200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CGCTTTCCCAAAAAATCCAC, downstream forward: _UP4_TAAATGTAAGAAATAGAGAABKK06200 ([gene|938B55332DFB2B465D0D5AD530550CED5AC30A92|ydjH]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK06200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CGCTTTCCCAAAAAATCCAC, downstream forward: _UP4_TAAATGTAAGAAATAGAGAAReferences
